Hagi-Yusuf, Jama (2021) Development of a high-throughput assay for fatty acid decarboxylases. Masters thesis, Concordia University.
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Abstract
Biorenewables have the potential to move society’s dependence away from petrol-based industrial products, towards cleaner and more sustainable sources. The technology has moved from focussing on low energy density ethanol- or butanol-based fuel sources to more complex,
energy rich hydrocarbons. Recently, a heme-dependent P450 decarboxylase enzyme, OleTJE, was discovered in the bacterium Jeotgalicoccus sp 8456. This enzyme catalyzes the decarboxylation
of a broad-range of long-chain fatty acids producing terminal alkenes that are key energy-rich hydrocarbons valuable for biofuels. Here, we developed an absorbance-based high-throughput assay that facilitated the determination of the activity and Michaelis-Menten kinetics of OleTJE. We screened OleTJE decarboxylation by detecting CO2, a product of decarboxylation. In this assay, CO2 was converted to bicarbonate and then catalyzed by phosphoenolpyruvate carboxylase and malate dehydrogenase to malate, leading to a decrease in NADH, the detecting
molecule. This assay was then used to screen a mutant OleTJE and a non-P450 decarboxylase, to showcase its versatility to screen mutant variants and other decarboxylases.
Divisions: | Concordia University > Faculty of Arts and Science > Biology |
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Item Type: | Thesis (Masters) |
Authors: | Hagi-Yusuf, Jama |
Institution: | Concordia University |
Degree Name: | M. Sc. |
Program: | Biology |
Date: | March 2021 |
Thesis Supervisor(s): | Kwan, David |
ID Code: | 988407 |
Deposited By: | Jama Hagi-Yusuf |
Deposited On: | 07 Jul 2022 17:02 |
Last Modified: | 07 Jul 2022 17:02 |
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